MAE 298, Winter 2008
Network Theory and Applications
Useful Software Packages
Several existing software packages are extremely useful for network analysis. Most software below is open source, and available for various platforms.
CLASS RESOURCES

  • Online reference materials for class Lectures

    • GRAPH VISUALIZATION

  • GGobi data visualization system

  • Graphviz, graph visualization project.

  • Pajek, analysis and visualization of large networks.

  • Topfish, a viewer for very large graphs.

  • Analytic Technologies, Netdraw, free net visualization program with GUI.

  • aNETmation Sophie Engle's MAE 298 class project
    • R RESOURCES

  • The R Project for Statistical Computing

    • Norm Matloff's R tutorial
    Vincent Zoonekynd's R tutorial

  • bioconductor.org
  • help: Rgraphviz on Mac OSX
  • Documentation for package `Rgraphviz'
  • Tutorial (if you get Rgraphviz working)